.. mpi.is-brain-connectivity-plugin documentation master file, created by sphinx-quickstart on Sun Apr 22 10:51:36 2018. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. Welcome to mpi.is-brain-connectivity-plugin's documentation! ============================================================ .. image:: /_static/paraview_preview.png :height: 300 .. toctree:: :maxdepth: 2 :caption: Contents: pages/gallery pages/installation pages/plugin_details pages/other_tools pages/conversion_tools This package contains a set of python tools for assisting in the visualization of brain connectivity information. The package contains: * a **Paraview filter**, that is a parametrizable *plugin* running in a Paraview visualization pipeline. This plugin shows the connectivity of the brain sites, in a raw or summarized fashion, * utility functions for converting files and performing off-line computation on the brain connectivity References ---------- This package was developed by *Lennart Bramlage* and *Raffi Enficiaud* at the `Software Workshop` Central Scientific Facility of the Max Planck Institute for Intelligent Systems, in Tübingen, Germany. The details of the computations are given in the following report: * `Design of a visualization scheme for functional connectivity data of Human Brain `_, Lennart Bramlage, Bachelor Thesis, Hochschule Osnabrück - University of Applied Sciences, 2017. .. _LennartBA : https://is.tuebingen.mpg.de/publications/bramlage-2017 Installation ------------ The installation procedures are described on the page :doc:`pages/installation`. How to use the plugin --------------------- The usage of the plugin is detailed in the page :doc:`pages/plugin_details`. Utility function ---------------- The additional tools are described in the pages :doc:`pages/other_tools` and :doc:`pages/conversion_tools`. License ------- The code contained in this repository is released under the MIT license and copyright is owned by * Max Planck Society * Lennart Bramlage * and Raffi Enficiaud. See the `LICENSE.txt` file at the root folder of the repository for more information. Indices and tables ================== * :ref:`genindex` * :ref:`modindex` * :ref:`search`